Shortcut Guide – Geospatial Modeling & Visualization / A Method Store for Advanced Survey and Modeling Technologies Thu, 22 Mar 2018 11:56:53 +0000 en-US hourly 1 https://wordpress.org/?v=6.9.4 Using the Bartington Grad 601 with Two Sensors in the Field /scanning/using-the-bartington-grad-601-with-two-sensors-in-the-field/ Mon, 16 May 2011 13:03:36 +0000 /?p=2563 Continue reading ]]> [wptabs mode=”vertical”] [wptabtitle] Using the Bartington Grad 601 with Two Sensors in the Field[/wptabtitle] [wptabcontent]Using the Bartington Grad 601 with Two Sensors in the Field
Jason T. Herrmann
Center for Advanced Spatial Technologies
University of Arkansas
written for the geophysical field school at Tell el-Amarna, January, 2011

The following is a simplified version of the concepts and steps described in the Bartington Grad601-2 manual colored with some of the practices and preferences of the author. These instructions assume that you have a survey area selected and gridded for survey. Surveys are most often conducted by methodically covering 20 x 20 meter squares set in a grid. The Grad601-2 has two gradiometers mounted on a trapeze that is one meter long, but archaeological surveys are often conducted at 50cm resolution. To achieve this density of readings, the surveyor will need to plot a survey strategy that has overlapping coverage under the span of the trapeze. For more detail on this and other aspects of instrument or survey methods, see the Bartington Grad601-2 survey manual.


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[wptabtitle] Prepare for Survey [/wptabtitle] [wptabcontent]
Be Metal Free
It is important that the user be absolutely metal free for the survey. After you let the instrument warm up, you can check to see if your survey wear is metal free by running the Grad 601-2 in SCAN mode and moving your body around the sensors paying particular attention to your shoes, waistline, wrists and headgear. If there is a change in the readings outside of normal drift (±0.2 nT), then you should identify the magnetic item and remove it from your person before survey.[/wptabcontent]

[wptabtitle] Let the Instrument Warm Up[/wptabtitle] [wptabcontent]
Letting the instrument warm up as you set the survey grid will help you to avoid any drift in readings as you survey. Assemble and turn on the gradiometer as soon as you get into the field.[/wptabcontent]

[wptabtitle] Assemble the Gradiometer[/wptabtitle] [wptabcontent]
If you are using the CAST gradiometer, be aware that it has been found that the sensor with the serial number 157 prefers to be on the left and 168 works better on the right. This will make tuning in the field go much more quickly. Slide the gradiometer rods into the clamps on the trapeze and firmly tighten the screws to lock the gradiometers into place. Attach the gradiometers to the data logger by screwing the connector wires into the gradiometers. Don the harness and adjust the straps so that the harness is comfortable. There is a strap to extend the belt on the harness if you need it. Use the plastic clips on the harness to hang the trapeze from the harness using the rubber rings. Adjust the straps on the harness to get the sensors as close to the ground as possible but still high enough to walk smoothly and comfortably. Having the sensors hang 20cm above the ground surface is ideal.

Press the ON/OFF button to activate the Grad601-2.[/wptabcontent]
[wptabtitle] Conducting Survey : Setting Parameters[/wptabtitle] [wptabcontent]

Use the arrow keys to navigate the menu in the data logger and press STEP to cycle through the options for each menu item. The individual parameters and available settings are explained below with the standard selection in bold:

Pace: the walking pace of the operator. Most surveys are between 0.7 and 1.0 secs. Since the data you record is an average of almost continuous variation sensed by the instrument during data collection, the slower you walk, the smoother your data will be.
Grid Size: select the size of grid – 10 x 10, 20 x 20, 30 x 30 or 40 x 40m.
Start: select the starting direction of the grid, N, NE, E, SE, S, SW, W or NW. This depends on your grid orientation. If your grid is oriented north and you are starting in the southwest corner then you may want to select N or NW as your starting direction. Pattern: select the traverse pattern to be followed – Parallel or ZIGZAG.
Lines/m: select the required number of data lines per meter – 1, 2 or 4. Two (2) lines per meter is standard (50cm transect spacing).
Samples/m: select the number of samples per meter along each line – 1, 2, 4 or 8. 8 samples per meter is the standard setting, but is not available for grids of 40 x 40m.
Range: select the full scale range of 100nT (resolution 0.03nT) or 1000nT (resolution 0.1nT).
Audio: select the audio output for scanning and survey operations – off or ON.
Volume: select volume – HIGH or low.
Threshold: select the deviation in nT at which the alarm is required to operate during a scan operation – increments in units, tens and hundreds and thousands of nT. When the field deviates by the level selected, the ALARM message will be shown in the display for the appropriate sensor, and the audio output rate will start to increase. The audio tone varies from the value set to about ten times this value. This depends on the background values at your survey site. 100nT is generally a safe threshold.
Sensors: select the number of sensors to be used – 1 or 2
Reject: select the frequency of 50 or 60Hz to reduce noise in the data.[/wptabcontent]
[wptabtitle] Tuning the Instrument [/wptabtitle] [wptabcontent]

What you will need:

  1. Grad 601-2
  2. Compass
  3. Stakes or markers

One of the many wonderful things about the Bartington Grad 601-2 is how easy it is to tune.

  1. Before you begin to tune the instrument, set the gradiometer to SCAN and see if you can find a magnetically ‘quiet’ spot to tune.
  2. Use a compass to lay out a place where you can tune the instrument. You will need to accurately identify the cardinal directions, so mark the four cardinal directions with nonmagnetic materials in the magnetically quiet spot that you have identified.
  3. Now you are ready to tune the instrument. Navigate to ADJUST GRADIOMETER and follow the simple directions to zero the instrument. To get the best adjustment, try to elevate the magnetometer as high as possible above the ground. If you don’t have a nonmagnetic stool or ladder, hold the instrument high over your head. Try your best to be consistent in holding the instrument in the same space throughout the tuning process. If the instrument is exceptionally out of tune, the Grad 601-2 may ask you to repeat the process. Once you have finished tuning, run SCAN and look at the measurements coming in to the gradiometers while facing north in the spot where you have tuned. They should both be close to 0.0 nT.
  4. With the Grad 601-2 strapped to the harness, go to the start point of your survey and stand as if you are ready to begin survey. Take note of the readings at this point while the Grad 601-2 is scanning. After several grid squares, come back to this point and see if you get similar readings. If they are different by more than 0.5nT, you will want to adjust the gradiometer again before continuing.

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[wptabtitle] Collecting Data [/wptabtitle] [wptabcontent]

Remember, this set of instructions assumes that you have already set up your survey grid and that you are using two sensors mounted one meter apart.

  1. Stand at the “lower left” corner of your survey square where the end of your first transect would be the ‘top’ of the survey square. Face the survey direction. If your transects are oriented to the north, this would be the southwest corner. Be sure to start all surveys in the same corner.
  2. If you are surveying with two sensors and plan a map that has transects that are spaced at 50cm, you will need to pass over the grid so that the survey transects shuffle together during survey. On your first transect, you would walk a line that is 75cm from the corner. Your return transect would be 1.25m from the corner.
  3. Press ENTER or the green button on the trapeze when you begin a line. If you have set the parameters correctly and walked at the correct pace the Grad601-2 will beep every time you pass over a meter mark on your survey rope and beep twice at the end of the transect.
  4. Press ESC or the red button on the trapeze to stop survey during a traverse.
  5. If you have made a mistake, you can delete the current line (or if completed, the last line) by navigating to BACK ONE TRAV and pressing ENTER. You will delete another line every time you press ENTER.
  6. Continue the survey until the square is finished. Stopping during survey could introduce some unwelcome interference into your data.

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[wptabtitle] Take a Break[/wptabtitle] [wptabcontent]
It is okay to leave the Grad 601-2 on if you are going to take a short break. When not surveying, please try to leave the instrument in the shade. If there is no shade cover, at least protect the computer/data logger with a cloth to protect it from the sun.

Turn the Grad 601-2 off if you are taking a longer break, say for second breakfast or lunch. You will need to re-adjust the instrument when you begin survey again.[/wptabcontent]
[wptabtitle] Downloading Data [/wptabtitle] [wptabcontent]

The Bartington Grad 601-2 will organize data from a zig-zag survey with two sensors as if it were collected with one sensor with a unidirectional survey prior to downloading, therefore no additional organization of readings is required after downloading. This applies for all three downloading methods.

What you will need:

  1. Bartington data logger
  2. Bartington Grad601 software
  3. Download cable (and driver if necessary)
  4. Computer

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[wptabtitle] Download Steps [/wptabtitle] [wptabcontent]

  1. Make sure you have the Bartington Gradiometer download utility installed on your computer. This small program can be downloaded from Bartington Instruments’ website or installed from a disk that should be packed with the gradiometer.
  2. Connect the computer to the Grad 601-2 via the serial port in the back of the Gradiometer. Use a serial to USB connector if your computer does not have a serial port (as most new laptops do not). If you are using a serial to USB cable, be sure to install the proper driver for the cable before attempting to download.
  3. Activate the Bartington download utility.
  4. Choose OUTPUT DATA from the menu on the Grad 601-2 data logger. When you do, the screen should read WAITING FOR PC.
  5. Identify the correct COM port for download. If you just installed a driver for a cable, you were probably notified which port the driver was applied to.
  6. Choose the data format for download. XYZ format is recommended, as it is the most versatile and can be recognized by most programs.
  7. Hit START when you are ready to download and watch the bytes pour in!
  8. The download software will ask you to save the data when you are finished. Generally, you will want to Save All files, and save them with a unique identifier. One recommended file naming strategy is to save data with a name that includes the date they were collected and the sequential number of the grid square collected. For example, data from the first three grid squares collected on January 13 would be saved as 01-13-01, 0113-02 and 01-13-03. To save all the grids from January 13 in this scheme, enter “01-13-“ in the windows explorer window when prompted to choose a name for the files. The grid number will automatically be added after the dash.
  9. You will get two files for each grid square, a .dat file that will hold the data and a .hdr file that has the parameters for each grid square.

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[wptabtitle] Charging and Care [/wptabtitle] [wptabcontent]

The Grad 601-2 holds a charge that will serve many days of survey. When you need to charge the battery, slide the charge port cover over and attach the AC charger. This charger has interchangeable plugs for use outside of the United States.[/wptabcontent] [/wptabs]

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Polyworks Interface Basics /scanning/software/polyworks/shortcut-guide-polyworks/polyworks-interface-basics-2/ Tue, 10 May 2011 21:54:25 +0000 /2304/polyworks-interface-basics/ Continue reading ]]> This document will introduce you to the inferface basics of Polyworks.
Hint: You can click on any image to see a larger version.

[wptabs style=”wpui-alma” mode=”vertical”] [wptabtitle] INTRODUCTION TO WORKSPACE MANAGER[/wptabtitle]

[wptabcontent]
Polyworks is a modularized package that offers a centralized workspace for organizing component parts of 3D data processing from scan alignment to meshing to inspection. Users can access any of the main modules from the Polyworks Workspace Manager as well as individually from the Start Menu. The principal modules and their functionality are listed in Figure 1 below:

Figure 1: Polyworks Workspace Manager showing principal software modules

The Polyworks Workspace is meant to house all processing components related to a project. Therefore it is best to create workspaces that are specific to a given project. For example with object scanning projects where multiple objects of a collection are scanned and process, a workspace should ideally be created for each individual object.

When a Polyworks Workspace is saved, a .pwk file is created (sample.pwk) along with an associated workspace file structure (sample_Files). The associated file structure (shown in Figure 2 below) manages all of the projects from the internal modules (IMAlign, IMEdit, etc…) as well as the data imported and exported from those modules.

Figure 2: Polyworks Workspace file (PWK) and additional workspace files

When moving files from one location to another, it is recommended to first zip a workspace to ensure that the workspace data structure and organization are retained. For more on the Polyworks Workspace Manager, please reference the Workspace Manger Basics.pdf from the Help menu in Polyworks.[/wptabcontent]

[wptabtitle] DESCRIPTION OF PRIMARY MODULES[/wptabtitle] [wptabcontent]
IMAlign
IMAlign supports scan alignment of 3D digitized datasets. IMAlign offers direct interaction with a list of different digitizers as well as import support for a range of point cloud and mesh formats. Here users can align different datasets and prepare them for subsequent meshing.

Figure 3: List of import formats for IMAlign

IMMerge
IMMerge is the meshing utility of Polyworks that produces a polygonal model directly from an IMAlign project. Note – Only point clouds can be meshed in IMMerge.

IMEdit
IMEdit is the mesh editing module of Polyworks. Here a number of mesh cleanup operations are available including hole filling and smoothing. Curve Creation and NURBS Surfacing options are also available in IMEdit.

IMInspect
IMInspect offers product inspection, measurement, and comparison capabilities. Here users can import original 3D point clouds, polygonal meshes, and CAD datasets and perform a range of different measurements and comparisons. Primitive fitting as well as feature extraction is performed in IMInspect.[/wptabcontent]

[wptabtitle] DESCRIPTION OF LESSER MODULES[/wptabtitle] [wptabcontent]
IMCompress
IMCompress is a module completely dedicated to model reduction or decimation. The same capabilities are available from inside IMEdit.

IMTexture (Add-On)
IMTexture is an optional module available that generates texture maps from vertex colors for reduced models. It is currently available from Innovmetric for – Academic pricing.

IMView

IMView is the free viewing software provided by Innovmetric. It is available in the main product sweet and also standalone from the Innovmetric website.

IMKey

IMKey is the licensing utility for the entire Polyworks suite. License borrowing capabilities are available here.[/wptabcontent]

[wptabtitle] MOUSE BUTTON FUNCTIONALITY[/wptabtitle] [wptabcontent]

Polyworks Mouse Button Functionality

Left: Rotate Shift + Middle: Boxed Zoom In
Middle: Pan Shift + Right: Rotate about Viewing Axis
Right: Zoom

In addition to the basic mouse functionality listed above, there are also options for single button controls available in each of the modules. These controls are shown below in Figure 4.

Figure 4: Mouse Button Behavior Options in Polyworks modules[/wptabcontent]

[wptabtitle] SCENE DISPLAY OPTIONS[/wptabtitle] [wptabcontent]

Scene Display Options (all modules)

The main display options in Polyworks are available by clicking on two highlighted icons in Figure 5. These icons are available in all of the main modules and may vary slightly between the different modules.

Figure 5: (Left) Polyworks Viewing Options and (Right) Scene Options as shown in IMAlign

The object display clip_image010options (shown bottom left in Figure 5 above) are covered here in more detail.
Object color Mode
Point: Displays image texture data
Default: Displays all scans with default gray material
Object: Displays each scan with unique color
Image Subgroup: Displays each image subgroup with unique color
Error Map: Displays error map from best fit alignment (if option is selected during alignment
operation)
Default Static Display
Drawing Type
Flat: Displays as mesh data set with flat shading (allows you to see individual facets)
Point: Display as point cloud
Smooth: Displays as mesh data set with smooth shading
Wireframe: Displays wireframe of mesh

Subsampling
1/1
1/4: One point is displayed for every 4 points
1/16
1/64[/wptabcontent]

[wptabtitle] SELECTION TOOLS[/wptabtitle] [wptabcontent]

Selection Tools

The user activates selection in Polyworks by tapping the space bar. Tapping the space bar again also deactivates selection and switches to view manipulation/scene navigation.

To perform a selection the user must:
(Hold) Shift: Allows Volumetric Selection – necessary for selecting within point clouds
(Optional Hold) Ctrl: Allows Polygonal Outline of Selection.
No Ctrl: Freeform selection

(Hold) Middle Mouse button-
to trace the selection

The Selection Menu shown in Figure 6 below is available in all PW modules. The default selection mode is set to toggle, therefore to append a selection or deselect – the user must change the selection mode to mark or deselect respectively.

Figure 6: Selection Modes in Polyworks[/wptabcontent]

[wptabtitle] SHORTCUT KEYS[/wptabtitle] [wptabcontent]

Shortcut Keys

Keys Function
Ctrl + Shft + A Select All
Ctrl + Shft + D
Hide Scans
Can also middle click on scan name in TOC
Ctrl + Shft + R Restore Scans
Ctrl + Shft + E Ignore Scans (ignored for most operations)
Ctrl + Shft + U Use Scans
Ctrl + Shft + K Keep Scan (Keeps selected scan – hides all others)
Ctrl + Shft + L Lock Scan
Ctrl + Shft + O Unlock Scan

[/wptabcontent]

[wptabtitle] IMALIGN BASICS[/wptabtitle] [wptabcontent]

IMAlign Basics (Getting Started)

clip_image015

Figure 7: Remember to set IMAlign options as suggested below prior to importing any data

IMAlign is the Polyworks module that allows you to import and align scan data. When you first open IMAlign, it’s good to define a couple of parameters.

Before you import any data, open IMAlign options and change the Digitizer from Generic Close Range to the scanner you are working with and change the working units to the digitizer units. Also, turn off the Interactive Mode Wizard and the Unknown Units Wizard. Also, under Alignment change Subsampling from 1/4 to 1/1 and under images, Max Angle choose 85. Next, go to Tools – Save Configuration (to save the new settings).

clip_image017

Figure 8: The highlighted icon controls how the scan data will be displayed in the scene.[/wptabcontent]

[wptabtitle] RECOMMENDED VIEWING OPTIONS[/wptabtitle] [wptabcontent]Below are the recommended settings for the Viewing Options

Object color Mode Recommended parameters are bolded/italicized
Point: Displays image texture data (Intensity (I) data for Optech; RGB data for Leica)
Default: Displays all scans with default gray material
Object: Displays each scan with unique color
Image Subgroup: Displays each image subgroup with unique color
Error Map: Displays error map from best fit alignment (if option is selected during alignment
operation)
Default Static Display Recommended parameters are bolded/italicized
Drawing Type
Flat: Displays as mesh data set with flat shading (allows you to see individual facets)
Point: Display as point cloud
Smooth: Displays as mesh data set with smooth shading
Wireframe: Displays wireframe of mesh

Subsampling
1/1
1/4 : One point is displayed for every 4 points
1/16
1/64

Default Dynamic Display (Recommended parameters bolded/italicized)
Drawing Type
Point

Subsampling
1/16 or 1/64

You are now ready to begin importing scan data into your IMAlign Project![/wptabcontent] [/wptabs]

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